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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
target gene predictions
103
accessible chromatin
95
chromatin state
77
binding sites
50
gene expression
50
histone modifications
24
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
3
pQTL
2
caQTL
Date released
201
February, 2021
168
September, 2022
34
November, 2021
33
June, 2020
31
October, 2022
18
February, 2024
15
September, 2023
14
August, 2021
10
August, 2017
10
January, 2020
9
February, 2020
9
May, 2020
7
January, 2022
7
March, 2023
7
November, 2022
6
March, 2020
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2024
Available data
426
bed bed3+
85
bed bed9
66
tsv
57
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
604
Homo sapiens
Biosample type
244
primary cell
176
cell line
146
tissue
38
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
545
AMP
34
ENCODE
15
KPMP
4
ITG
3
LungMap
2
community
1
T1D
Genome assembly (visualization)
529
hg19
151
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
604 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
16
1
2
6
osteoblast
2
5
1
3
2
2
foreskin fibroblast
6
1
1
4
2
fibroblast of lung
6
4
2
pericyte cell
1
10
1
+ See 47 more…
cell line
K562
7
1
7
2
1
GM12878
2
1
2
2
1
GM06990
2
1
1
2
1
HL-60
2
1
1
2
1
CMK
2
1
1
1
1
+ See 38 more…
tissue
small intestine
29
1
15
1
adipose tissue
7
2
6
1
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
3
duodenal mucosa
4
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
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