Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
target gene predictions
125
accessible chromatin
120
chromatin state
73
histone modifications
68
gene expression
48
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
218
February, 2021
200
September, 2022
42
March, 2020
40
June, 2020
35
January, 2020
32
November, 2021
27
February, 2020
25
May, 2020
24
January, 2022
19
February, 2024
17
October, 2022
15
September, 2023
13
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2024
1
November, 2019
Available data
475
bed bed3+
130
tsv
107
bed bed9
72
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
759
Homo sapiens
Biosample type
385
tissue
253
primary cell
82
cell line
40
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
705
AMP
32
ENCODE
15
KPMP
4
ITG
3
LungMap
1
T1D
Genome assembly (visualization)
646
hg19
252
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
760 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
2
18
3
1
2
1
1
adipose tissue
7
2
6
3
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
caudate nucleus
5
2
4
1
1
2
3
1
omental fat pad
5
2
2
2
2
3
+ See 65 more…
primary cell
fibroblast
16
2
1
6
osteoblast
2
5
1
2
2
3
foreskin fibroblast
6
1
1
2
4
fibroblast of lung
6
4
2
pericyte cell
1
10
1
+ See 48 more…
cell line
SK-N-DZ
4
1
2
1
SK-N-MC
2
1
1
1
2
SK-N-SH
4
2
1
BE(2)-C
1
1
1
1
2
GM23248
2
1
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 6 more…
See all biosamples
Download