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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
target gene predictions
125
accessible chromatin
120
chromatin state
73
histone modifications
68
gene expression
50
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
differential activity
2
caQTL
2
pQTL
Date released
218
February, 2021
200
September, 2022
42
March, 2020
40
June, 2020
35
January, 2020
32
November, 2021
27
February, 2020
25
May, 2020
24
January, 2022
17
February, 2024
17
October, 2022
13
August, 2017
11
August, 2021
9
September, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2023
1
March, 2024
1
November, 2019
Available data
475
bed bed3+
118
tsv
107
bed bed9
72
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
747
Homo sapiens
Biosample type
383
tissue
243
primary cell
82
cell line
40
in vitro differentiated cells
Organ
735
epithelium
521
kidney
390
brain
368
connective tissue
294
musculature of body
233
lung
217
vasculature
216
intestine
206
heart
200
pancreas
195
limb
167
blood vessel
161
bodily fluid
160
skin of body
152
blood
131
embryo
131
liver
130
large intestine
110
extraembryonic component
100
eye
89
stomach
74
adipose tissue
73
bone element
68
mammary gland
65
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
17
thyroid gland
16
lymphatic vessel
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
697
AMP
32
ENCODE
9
KPMP
4
ITG
3
LungMap
2
community
1
T1D
Genome assembly (visualization)
646
hg19
252
GRCh38
2
hg18
annotation_type!
target gene predictions
differential activity
BIOSAMPLE
TYPE
748 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
caQTL
pQTL
tissue
brain
29
2
18
3
1
2
1
1
adipose tissue
7
2
6
3
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
caudate nucleus
5
2
4
1
1
2
3
1
omental fat pad
5
2
2
2
2
3
+ See 65 more…
primary cell
fibroblast
16
2
1
6
osteoblast
2
5
1
2
2
3
foreskin fibroblast
6
1
1
2
4
fibroblast of lung
6
4
2
pericyte cell
1
10
1
+ See 48 more…
cell line
SK-N-DZ
4
1
2
1
SK-N-MC
2
1
1
1
2
SK-N-SH
4
2
1
BE(2)-C
1
1
1
1
2
GM23248
2
1
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 6 more…
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