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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
target gene predictions
110
accessible chromatin
96
chromatin state
67
gene expression
35
binding sites
29
histone modifications
27
eQTL
26
variant allelic effects
15
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
151
February, 2021
146
September, 2022
36
November, 2021
23
February, 2024
23
June, 2020
22
January, 2020
20
May, 2020
19
August, 2021
18
February, 2020
15
March, 2020
15
September, 2023
12
October, 2022
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2019
3
November, 2020
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
January, 2021
1
June, 2021
1
May, 2019
Available data
363
bed bed3+
93
tsv
84
bed bed9
75
bigWig
12
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
569
Homo sapiens
Biosample type
256
tissue
243
primary cell
38
in vitro differentiated cells
32
cell line
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
508
AMP
36
ENCODE
15
KPMP
4
ITG
3
LungMap
2
community
1
T1D
Genome assembly (visualization)
473
hg19
188
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
569 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
tissue
heart
37
5
21
3
1
1
2
heart left ventricle
11
3
8
1
1
1
2
adipose tissue
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
1
coronary artery
3
3
3
1
2
2
3
1
+ See 17 more…
primary cell
fibroblast
16
1
2
6
osteoblast
2
5
1
2
3
2
foreskin fibroblast
6
1
1
4
2
fibroblast of lung
6
4
2
pericyte cell
1
10
1
+ See 49 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
cell line
GM23248
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
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