Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
gene expression
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
106
differential activity
101
chromatin state
74
binding sites
57
variant allelic effects
53
histone modifications
22
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
110
November, 2021
45
June, 2020
32
February, 2024
22
November, 2022
21
January, 2020
11
January, 2021
10
April, 2020
10
February, 2023
8
August, 2021
7
May, 2021
6
October, 2019
5
May, 2022
5
September, 2022
2
November, 2020
2
September, 2018
1
February, 2021
1
June, 2021
1
May, 2020
1
November, 2019
Available data
297
bed bed3+
215
bigWig
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
300
Homo sapiens
Biosample type
221
primary cell
40
tissue
21
in vitro differentiated cells
18
cell line
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
169
AMP
110
ENCODE
11
T1D
10
LungMap
Genome assembly (visualization)
299
hg19
163
GRCh38
BIOSAMPLE
TYPE
300 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
fibroblast
16
endothelial cell
15
pericyte cell
10
hepatocyte
8
pancreatic beta cell
8
+ See 95 more…
tissue
pigmented layer of retina
20
adipose tissue
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
chondrocyte
5
adipocyte
4
SGBS preadipocytes
1
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
cell line
EndoC_BH1
8
fibroblast of cardiac tissue
2
GM23248
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
+ See 5 more…
See all biosamples
Download