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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
target gene predictions
123
candidate regulatory elements
100
accessible chromatin
76
binding sites
73
chromatin state
49
histone modifications
15
variant allelic effects
13
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
189
September, 2022
157
February, 2021
50
November, 2021
44
February, 2024
32
June, 2020
31
October, 2022
17
May, 2021
10
August, 2021
9
August, 2017
9
January, 2020
9
March, 2020
9
May, 2020
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
510
bed bed3+
64
bed bed9
55
bigWig
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
593
Homo sapiens
Biosample type
244
primary cell
226
cell line
74
tissue
48
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
534
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
593
hg19
173
GRCh38
2
hg18
BIOSAMPLE
TYPE
593 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
10
1
10
1
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
osteoblast
2
2
5
3
1
2
+ See 34 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
8
7
2
1
6
1
3
omental fat pad
2
5
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 5 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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