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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
59
target gene predictions
48
chromatin state
40
gene expression
33
accessible chromatin
31
binding sites
25
histone modifications
17
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
120
September, 2022
108
February, 2021
20
June, 2020
16
February, 2024
16
May, 2021
12
October, 2022
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
August, 2021
7
March, 2023
7
November, 2022
6
January, 2022
2
May, 2022
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
November, 2020
1
October, 2019
Available data
274
bed bed3+
48
tsv
41
bed bed9
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
365
Homo sapiens
Biosample type
201
primary cell
84
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
557
epithelium
476
kidney
445
brain
365
connective tissue
356
musculature of body
299
lung
270
intestine
230
limb
229
heart
218
bodily fluid
213
embryo
207
blood
201
pancreas
199
vasculature
194
skin of body
168
large intestine
161
blood vessel
143
extraembryonic component
132
liver
110
stomach
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
bone element
78
prostate gland
73
eye
71
placenta
64
penis
63
adrenal gland
62
lymph node
61
artery
61
ureter
48
gonad
48
thymus
43
spinal cord
41
esophagus
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
21
thyroid gland
19
mouth
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
365
AMP
18
ENCODE
15
KPMP
4
ITG
1
T1D
Genome assembly (visualization)
309
hg19
58
GRCh38
2
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
365 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
1
2
2
3
2
fibroblast of dermis
4
4
3
1
fibroblast
2
1
2
6
+ See 37 more…
tissue
adipose tissue
7
8
6
3
1
1
4
1
subcutaneous adipose tissue
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
bone tissue
4
+ See 5 more…
in vitro differentiated cells
adipocyte
4
6
6
1
3
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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