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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
203
candidate regulatory elements
201
gene expression
173
accessible chromatin
134
target gene predictions
112
chromatin state
81
binding sites
59
histone modifications
57
variant allelic effects
36
differential activity
21
eQTL
6
Fine-mapped variants
4
caQTL
Date released
330
February, 2021
304
September, 2022
94
February, 2024
51
May, 2021
49
June, 2020
43
March, 2023
30
August, 2021
25
May, 2020
24
January, 2020
22
November, 2022
18
February, 2020
18
October, 2022
15
March, 2020
13
February, 2023
10
August, 2017
7
August, 2018
7
January, 2022
7
October, 2019
5
May, 2022
3
March, 2024
3
November, 2020
2
September, 2018
2
September, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
719
bed bed3+
218
tsv
102
bed bed9
100
bigWig
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1087
Homo sapiens
Biosample type
721
primary cell
167
tissue
122
cell line
76
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1087
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
837
hg19
191
GRCh38
2
hg18
BIOSAMPLE
TYPE
1087 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
7
2
1
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
endothelial cell
9
4
2
1
2
1
2
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 128 more…
tissue
adipose tissue
7
3
2
8
6
1
1
4
subcutaneous adipose tissue
2
5
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
1
2
2
2
2
1
+ See 28 more…
cell line
EndoC_BH1
8
8
1
1
1
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
+ See 27 more…
in vitro differentiated cells
adipocyte
4
1
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
2
1
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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