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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
target gene predictions
89
candidate regulatory elements
54
accessible chromatin
52
chromatin state
42
gene expression
35
binding sites
27
histone modifications
18
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
132
September, 2022
119
February, 2021
69
February, 2024
22
June, 2020
18
May, 2021
13
October, 2022
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
August, 2021
7
January, 2022
7
March, 2023
7
November, 2022
3
May, 2022
3
November, 2020
2
March, 2024
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
348
bed bed3+
50
tsv
45
bed bed9
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
465
Homo sapiens
Biosample type
214
primary cell
104
tissue
96
cell line
50
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
465
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
406
hg19
128
GRCh38
2
hg18
BIOSAMPLE
TYPE
465 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
fibroblast of dermis
4
4
3
1
fibroblast
2
1
2
6
+ See 38 more…
tissue
adipose tissue
8
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
uterus
2
3
1
1
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
cell line
HeLa-S3
55
5
3
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
foreskin fibroblast
1
1
1
+ See 9 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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