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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
123
target gene predictions
110
accessible chromatin
67
gene expression
35
binding sites
29
histone modifications
26
variant allelic effects
25
eQTL
15
Fine-mapped variants
14
differential activity
12
chromatin state
4
caQTL
2
pQTL
Date released
151
February, 2021
146
September, 2022
57
November, 2021
24
March, 2020
23
February, 2024
23
June, 2020
21
January, 2020
20
May, 2020
19
August, 2021
19
May, 2021
18
February, 2020
17
September, 2023
12
October, 2022
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
486
bed bed3+
91
tsv
bed bed9
75
bigWig
12
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
606
Homo sapiens
Biosample type
269
primary cell
258
tissue
46
in vitro differentiated cells
32
cell line
1
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
525
AMP
57
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
512
hg19
125
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
606 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
differential activity
chromatin state
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
osteoblast
2
2
5
2
3
2
foreskin fibroblast
6
2
1
4
2
fibroblast of lung
6
4
2
1
+ See 49 more…
tissue
heart
37
20
5
3
1
1
2
adipose tissue
7
8
2
3
1
1
4
heart left ventricle
11
7
3
1
1
2
1
subcutaneous adipose tissue
2
2
5
1
6
3
1
1
coronary artery
3
3
3
1
2
2
3
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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