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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
78
target gene predictions
46
chromatin state
31
binding sites
25
histone modifications
15
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
120
September, 2022
87
February, 2021
50
November, 2021
20
June, 2020
16
February, 2024
13
May, 2021
12
October, 2022
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2021
7
November, 2022
6
August, 2017
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
September, 2018
2
September, 2023
1
June, 2021
1
October, 2019
Available data
329
bed bed3+
55
bigWig
41
bed bed9
8
tsv
bigBed bed9
1
bigBed narrowPeak
Organism
385
Homo sapiens
Biosample type
234
primary cell
71
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
598
epithelium
417
brain
385
connective tissue
385
kidney
364
musculature of body
309
lung
283
intestine
233
limb
219
heart
217
bodily fluid
206
blood
205
embryo
199
skin of body
196
vasculature
184
pancreas
170
large intestine
151
blood vessel
145
extraembryonic component
123
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
68
adipose tissue
64
penis
64
ureter
62
lymph node
58
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
21
nerve
21
ovary
21
thyroid gland
19
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
326
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
385
hg19
121
GRCh38
2
hg18
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
385 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
16
4
1
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 32 more…
tissue
adipose tissue
2
7
8
6
1
1
3
omental fat pad
2
5
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
cartilage tissue
1
2
2
subcutaneous abdominal adipose tissue
5
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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