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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
target gene predictions
91
accessible chromatin
89
candidate regulatory elements
51
gene expression
50
chromatin state
35
binding sites
27
histone modifications
20
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
132
September, 2022
119
February, 2021
69
February, 2024
52
November, 2021
22
June, 2020
18
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
January, 2022
7
March, 2023
7
November, 2022
6
August, 2017
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
406
bed bed3+
65
tsv
56
bigWig
45
bed bed9
7
txt
bigBed bed9
1
bigBed narrowPeak
Organism
539
Homo sapiens
Biosample type
285
primary cell
107
tissue
96
cell line
50
in vitro differentiated cells
1
stem cell
Organ
947
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
311
lung
289
intestine
275
pancreas
258
vasculature
245
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
463
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
465
hg19
179
GRCh38
2
hg18
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
539 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
1
osteoblast
2
5
2
2
1
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
1
6
1
4
2
+ See 45 more…
tissue
adipose tissue
8
2
7
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
2
5
2
2
2
3
uterus
2
1
3
1
1
1
cartilage tissue
1
2
2
+ See 10 more…
cell line
HeLa-S3
55
5
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
foreskin fibroblast
1
1
1
+ See 9 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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