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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
115
target gene predictions
106
accessible chromatin
79
chromatin state
52
gene expression
35
binding sites
30
histone modifications
27
eQTL
22
variant allelic effects
16
differential activity
12
Fine-mapped variants
4
caQTL
2
pQTL
Date released
207
September, 2022
144
February, 2021
59
November, 2021
25
June, 2020
22
September, 2023
20
February, 2024
20
May, 2021
16
March, 2020
15
May, 2020
14
January, 2020
13
February, 2020
12
October, 2022
10
August, 2021
10
January, 2022
8
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
462
bed bed3+
83
tsv
71
bed bed9
69
bigWig
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
639
Homo sapiens
Biosample type
308
primary cell
245
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
871
epithelium
565
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
549
AMP
59
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
555
hg19
182
GRCh38
2
hg18
files.file_type!
txt
BIOSAMPLE
TYPE
639 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 53 more…
tissue
stomach
40
21
3
19
1
1
1
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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