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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
108
candidate regulatory elements
95
target gene predictions
92
accessible chromatin
64
chromatin state
42
gene expression
32
binding sites
27
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
168
September, 2022
118
February, 2021
52
November, 2021
22
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
12
October, 2022
10
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
382
bed bed3+
65
tsv
57
bed bed9
57
bigWig
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
522
Homo sapiens
Biosample type
278
primary cell
155
tissue
54
in vitro differentiated cells
34
cell line
1
stem cell
Organ
871
epithelium
565
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
444
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
455
hg19
141
GRCh38
2
hg18
files.file_type!
txt
BIOSAMPLE
TYPE
522 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 45 more…
tissue
placenta
26
15
1
14
1
2
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
olfactory neurosphere cell line
1
1
1
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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