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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
accessible chromatin
98
target gene predictions
64
chromatin state
53
candidate regulatory elements
47
gene expression
28
eQTL
19
binding sites
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
7
histone modifications
3
caQTL
2
pQTL
Date released
163
September, 2022
February, 2021
54
November, 2021
47
February, 2024
24
June, 2020
21
August, 2021
19
March, 2020
19
May, 2021
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
10
August, 2017
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
June, 2021
1
November, 2019
Available data
317
bed bed3+
73
bigWig
67
tsv
54
bed bed9
3
bigBed bed9
3
csv
1
bam
1
txt
Organism
473
Homo sapiens
Biosample type
275
primary cell
117
tissue
45
in vitro differentiated cells
35
cell line
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
350
connective tissue
283
musculature of body
245
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
393
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
395
hg19
177
GRCh38
4
hg18
month_released!
June, 2021
February, 2021
BIOSAMPLE
TYPE
473 results
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Clear Filters
accessible chromatin
target gene predictions
chromatin state
candidate regulatory elements
gene expression
eQTL
binding sites
variant allelic effects
differential activity
Fine-mapped variants
histone modifications
caQTL
pQTL
primary cell
fibroblast
16
4
2
1
6
hepatocyte
8
3
1
1
10
2
3
pericyte cell
10
10
1
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
4
4
3
2
+ See 46 more…
tissue
liver
4
10
9
7
1
7
1
1
adipose tissue
2
8
6
6
4
1
omental fat pad
2
2
2
2
2
2
3
subcutaneous adipose tissue
2
1
2
5
1
1
3
right lobe of liver
1
1
1
1
1
3
+ See 7 more…
in vitro differentiated cells
adipocyte
4
6
6
2
mesenchymal stem cell
1
3
2
2
chondrocyte
5
hepatocyte
1
1
1
hepatocyte(AFP)
3
+ See 8 more…
cell line
HepG2
1
3
2
1
2
4
GM23248
1
1
1
1
HuH-7
1
1
1
1
HT1080
1
1
1
HuH-7.5
1
1
1
+ See 5 more…
stem cell
mesenchymal stem cell
1
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