Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
50
target gene predictions
49
candidate regulatory elements
30
gene expression
27
chromatin state
21
binding sites
12
histone modifications
11
variant allelic effects
6
differential activity
6
eQTL
2
caQTL
Date released
75
September, 2022
56
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
12
October, 2022
11
June, 2020
March, 2023
7
May, 2021
5
February, 2020
5
January, 2020
5
May, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
208
bed bed3+
46
bigWig
30
tsv
26
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
276
Homo sapiens
Biosample type
276
primary cell
106
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
783
epithelium
309
kidney
276
connective tissue
165
vasculature
110
blood vessel
100
skin of body
87
pancreas
59
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
204
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
235
hg19
90
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
276 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
+ See 43 more…
See all biosamples
Download