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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
accessible chromatin
77
target gene predictions
48
chromatin state
40
candidate regulatory elements
27
gene expression
18
eQTL
14
differential activity
11
binding sites
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
120
September, 2022
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
235
bed bed3+
54
bigWig
41
bed bed9
41
tsv
2
bigBed bed9
1
bigBed narrowPeak
1
txt
Organism
339
Homo sapiens
Biosample type
220
primary cell
66
tissue
37
in vitro differentiated cells
15
cell line
1
stem cell
Organ
738
epithelium
445
kidney
339
connective tissue
337
brain
278
musculature of body
241
lung
240
pancreas
218
intestine
202
vasculature
196
heart
176
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
128
large intestine
127
liver
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
63
adipose tissue
59
adrenal gland
59
mammary gland
55
artery
55
placenta
52
bone element
49
prostate gland
43
ureter
38
gonad
37
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
265
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
291
hg19
121
GRCh38
2
hg18
month_released!
May, 2020
February, 2021
BIOSAMPLE
TYPE
339 results
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Clear Filters
accessible chromatin
target gene predictions
chromatin state
candidate regulatory elements
gene expression
eQTL
differential activity
binding sites
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
2
1
6
pericyte cell
10
10
1
1
fibroblast of lung
4
4
3
2
fibroblast of cardiac tissue
2
4
3
3
fibroblast of dermis
4
3
3
1
+ See 40 more…
tissue
adipose tissue
2
8
6
6
4
omental fat pad
2
2
2
2
2
2
3
subcutaneous adipose tissue
2
1
2
5
1
3
cartilage tissue
2
2
pancreatic stellate cell
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
6
6
2
mesenchymal stem cell
1
3
2
2
chondrocyte
5
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
+ See 4 more…
cell line
GM23248
1
1
1
1
HT1080
1
1
1
foreskin fibroblast
1
1
1
fibroblast of cardiac tissue
2
adipose-derived mesenchymal stem cell
1
+ See 2 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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