Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
accessible chromatin
66
target gene predictions
63
candidate regulatory elements
49
gene expression
40
chromatin state
23
binding sites
21
histone modifications
19
eQTL
14
differential activity
13
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
96
September, 2022
92
February, 2021
48
November, 2021
18
February, 2024
17
September, 2023
15
June, 2020
13
May, 2021
11
August, 2021
9
February, 2020
9
March, 2020
8
October, 2022
7
August, 2017
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
276
bed bed3+
63
tsv
50
bigWig
33
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
396
Homo sapiens
Biosample type
233
primary cell
95
tissue
49
in vitro differentiated cells
18
cell line
1
stem cell
Organ
949
epithelium
652
kidney
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
324
AMP
48
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
325
hg19
108
GRCh38
2
hg18
organ_slims!
brain
skin of body
BIOSAMPLE
TYPE
396 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
4
6
4
2
fibroblast of cardiac tissue
2
4
3
3
+ See 36 more…
tissue
adipose tissue
2
8
7
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
2
5
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
+ See 3 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download