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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
84
accessible chromatin
81
target gene predictions
51
chromatin state
50
gene expression
30
binding sites
25
histone modifications
20
eQTL
14
differential activity
13
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
129
September, 2022
111
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
11
August, 2021
11
October, 2022
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
330
bed bed3+
64
tsv
51
bigWig
44
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
463
Homo sapiens
Biosample type
272
primary cell
106
tissue
50
in vitro differentiated cells
34
cell line
1
stem cell
Organ
949
epithelium
652
kidney
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
389
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
390
hg19
122
GRCh38
2
hg18
organ_slims!
brain
BIOSAMPLE
TYPE
463 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
5
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
+ See 41 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
tongue
4
1
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
ACC112
2
1
1
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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