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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
accessible chromatin
113
candidate regulatory elements
100
target gene predictions
74
gene expression
73
chromatin state
45
binding sites
30
histone modifications
27
eQTL
26
differential activity
25
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
171
September, 2022
140
February, 2021
53
November, 2021
37
September, 2023
33
February, 2024
23
June, 2020
21
January, 2020
21
March, 2020
21
May, 2020
19
May, 2021
14
February, 2020
13
October, 2022
12
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
439
bed bed3+
112
tsv
78
bigWig
65
bed bed9
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
647
Homo sapiens
Biosample type
380
primary cell
179
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
546
AMP
53
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
530
hg19
192
GRCh38
2
hg18
organ_slims!
mouth
BIOSAMPLE
TYPE
647 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
endothelial cell of umbilical vein
2
6
4
5
2
1
osteoblast
5
2
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 61 more…
tissue
adipose tissue
2
7
8
3
6
1
4
1
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
2
5
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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