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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
accessible chromatin
70
candidate regulatory elements
69
target gene predictions
51
gene expression
44
chromatin state
24
binding sites
21
eQTL
21
histone modifications
18
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
105
September, 2022
96
February, 2021
48
November, 2021
18
February, 2024
17
June, 2020
17
September, 2023
13
May, 2020
13
May, 2021
12
February, 2020
12
March, 2020
11
August, 2021
11
January, 2020
9
October, 2022
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
300
bed bed3+
69
tsv
56
bigWig
37
bed bed9
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
431
Homo sapiens
Biosample type
242
primary cell
120
tissue
49
in vitro differentiated cells
19
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
359
AMP
48
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
357
hg19
123
GRCh38
2
hg18
organ_slims!
skin of body
BIOSAMPLE
TYPE
431 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
2
3
4
3
+ See 38 more…
tissue
adipose tissue
2
7
8
3
6
1
4
1
tibial nerve
3
6
3
2
4
2
2
3
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
hepatic stellate cell
1
1
+ See 4 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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