Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
candidate regulatory elements
98
target gene predictions
90
accessible chromatin
66
chromatin state
49
gene expression
27
binding sites
23
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
171
September, 2022
118
February, 2021
54
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
10
October, 2022
9
February, 2020
8
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
377
bed bed3+
65
tsv
58
bed bed9
57
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
525
Homo sapiens
Biosample type
271
primary cell
175
tissue
50
in vitro differentiated cells
28
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
445
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
451
hg19
144
GRCh38
2
hg18
organ_slims!
trachea
penis
BIOSAMPLE
TYPE
525 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
3
4
2
3
+ See 45 more…
tissue
small intestine
29
17
1
15
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
duodenal mucosa
4
2
3
+ See 9 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download