Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
53
target gene predictions
52
candidate regulatory elements
31
gene expression
29
chromatin state
19
binding sites
12
differential activity
12
histone modifications
9
variant allelic effects
6
eQTL
1
caQTL
Date released
81
September, 2022
57
February, 2021
52
November, 2021
15
September, 2023
13
February, 2024
12
June, 2020
10
October, 2022
8
May, 2021
7
March, 2023
5
February, 2020
3
April, 2020
3
January, 2022
3
May, 2020
3
May, 2022
3
November, 2020
2
January, 2020
2
January, 2021
2
May, 2024
1
August, 2017
1
August, 2018
1
August, 2021
1
June, 2021
1
October, 2019
Available data
209
bed bed3+
45
bigWig
37
tsv
28
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
286
Homo sapiens
Biosample type
286
primary cell
158
cell line
130
tissue
79
in vitro differentiated cells
2
stem cell
Organ
819
epithelium
309
kidney
283
connective tissue
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
212
AMP
52
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
239
hg19
90
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
286 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
trophoblast cell
1
5
7
4
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
4
6
4
2
+ See 45 more…
See all biosamples
Download