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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
accessible chromatin
76
target gene predictions
75
candidate regulatory elements
49
gene expression
46
chromatin state
28
binding sites
23
histone modifications
21
eQTL
14
differential activity
13
variant allelic effects
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
114
September, 2022
103
February, 2021
50
November, 2021
18
February, 2024
18
June, 2020
17
September, 2023
16
May, 2021
11
August, 2021
10
October, 2022
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
308
bed bed3+
65
tsv
51
bigWig
39
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
436
Homo sapiens
Biosample type
261
primary cell
95
tissue
49
in vitro differentiated cells
30
cell line
1
stem cell
Organ
949
epithelium
652
kidney
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
360
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
364
hg19
115
GRCh38
2
hg18
organ_slims!
vasculature
brain
embryo
BIOSAMPLE
TYPE
436 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
+ See 40 more…
tissue
adipose tissue
2
8
7
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
2
5
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
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