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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
281
gene expression
276
accessible chromatin
198
target gene predictions
170
candidate regulatory elements
96
chromatin state
93
differential activity
56
binding sites
51
variant allelic effects
48
histone modifications
24
eQTL
6
Fine-mapped variants
3
caQTL
2
pQTL
Date released
285
February, 2021
262
September, 2022
172
November, 2021
147
September, 2023
80
February, 2024
50
May, 2021
41
June, 2020
41
March, 2023
34
August, 2021
22
January, 2021
22
November, 2022
19
May, 2020
17
February, 2020
16
January, 2020
15
March, 2020
14
October, 2022
12
February, 2023
9
August, 2017
7
April, 2020
7
August, 2018
7
October, 2019
6
January, 2022
5
May, 2022
3
November, 2020
2
March, 2024
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
812
bed bed3+
356
tsv
211
bigWig
87
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1304
Homo sapiens
Biosample type
958
primary cell
204
tissue
74
in vitro differentiated cells
67
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
950
AMP
172
ENCODE
145
KPMP
22
T1D
7
LungMap
4
ITG
4
community
Genome assembly (visualization)
919
hg19
324
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
1304 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 172 more…
tissue
thymus
1
14
20
11
1
1
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
+ See 27 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 16 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 15 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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