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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
83
target gene predictions
78
accessible chromatin
74
chromatin state
74
gene expression
45
binding sites
30
histone modifications
27
eQTL
26
differential activity
25
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
174
September, 2022
141
February, 2021
37
September, 2023
33
February, 2024
23
June, 2020
21
January, 2020
21
March, 2020
21
May, 2020
19
May, 2021
14
February, 2020
13
October, 2022
12
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
389
bed bed3+
112
tsv
66
bed bed9
43
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
598
Homo sapiens
Biosample type
331
primary cell
179
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
550
AMP
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
481
hg19
140
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
598 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
+ See 59 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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