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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
114
candidate regulatory elements
104
accessible chromatin
100
target gene predictions
73
chromatin state
68
gene expression
38
binding sites
28
histone modifications
27
eQTL
24
variant allelic effects
23
differential activity
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
171
September, 2022
137
February, 2021
50
November, 2021
37
September, 2023
22
June, 2020
21
March, 2020
20
January, 2020
20
May, 2020
19
February, 2024
19
May, 2021
14
February, 2020
13
October, 2022
12
August, 2021
9
January, 2022
8
August, 2017
7
March, 2023
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
422
bed bed3+
103
tsv
70
bigWig
65
bed bed9
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
620
Homo sapiens
Biosample type
355
primary cell
179
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
949
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
522
AMP
50
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
513
hg19
174
GRCh38
2
hg18
organ_slims!
liver
BIOSAMPLE
TYPE
620 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 59 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
3
2
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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