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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
131
target gene predictions
121
accessible chromatin
99
chromatin state
76
gene expression
56
binding sites
39
histone modifications
30
eQTL
26
differential activity
26
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
246
September, 2022
189
February, 2021
61
November, 2021
37
September, 2023
34
February, 2024
27
June, 2020
21
January, 2020
21
March, 2020
21
May, 2020
21
May, 2021
14
February, 2020
14
October, 2022
12
August, 2021
12
January, 2022
11
March, 2023
9
August, 2017
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
March, 2024
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
555
bed bed3+
114
tsv
90
bed bed9
82
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
793
Homo sapiens
Biosample type
435
primary cell
204
tissue
95
cell line
58
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
684
AMP
61
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
671
hg19
228
GRCh38
2
hg18
BIOSAMPLE
TYPE
793 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
2
3
1
2
1
+ See 69 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 22 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 26 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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