Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
accessible chromatin
103
candidate regulatory elements
93
target gene predictions
62
chromatin state
gene expression
39
binding sites
31
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
118
February, 2021
51
November, 2021
25
June, 2020
16
February, 2024
13
May, 2021
13
October, 2022
11
May, 2020
10
August, 2021
9
January, 2020
9
March, 2020
8
September, 2023
7
August, 2017
7
November, 2022
6
January, 2022
6
March, 2023
4
January, 2021
4
May, 2022
3
April, 2020
2
February, 2020
2
November, 2020
2
October, 2019
2
September, 2018
1
February, 2023
1
June, 2021
Available data
397
bed bed3+
65
bigWig
54
bed bed9
22
tsv
2
bigBed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
490
Homo sapiens
Biosample type
260
primary cell
97
tissue
84
cell line
48
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
422
AMP
51
ENCODE
6
KPMP
4
ITG
4
T1D
3
LungMap
Genome assembly (visualization)
466
hg19
144
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
490 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 41 more…
tissue
adipose tissue
2
7
8
6
1
4
1
omental fat pad
2
5
2
2
2
3
subcutaneous adipose tissue
2
2
1
6
1
1
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 16 more…
cell line
GM23248
1
2
1
1
1
1
MG63
1
2
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
1
2
1
1
1
L1-S8
1
2
1
1
+ See 18 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download