Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
target gene predictions
137
candidate regulatory elements
76
chromatin state
66
accessible chromatin
59
gene expression
44
binding sites
35
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
201
September, 2022
161
February, 2021
69
February, 2024
30
June, 2020
23
May, 2021
19
August, 2021
17
September, 2023
13
October, 2022
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
455
bed bed3+
73
tsv
68
bed bed9
23
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
620
Homo sapiens
Biosample type
251
primary cell
158
cell line
130
tissue
79
in vitro differentiated cells
2
stem cell
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
596
AMP
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
539
hg19
150
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
620 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
trophoblast cell
5
7
4
1
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
fibroblast of dermis
4
4
3
1
+ See 43 more…
cell line
H1-hESC
39
1
1
1
8
2
1
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 26 more…
tissue
adipose tissue
8
7
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
+ See 12 more…
in vitro differentiated cells
adipocyte
6
4
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
chondrocyte
5
+ See 15 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
Download