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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
gene expression
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
106
differential activity
101
chromatin state
binding sites
57
variant allelic effects
53
histone modifications
22
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
271
September, 2022
253
February, 2021
177
November, 2021
172
September, 2023
88
February, 2024
50
May, 2021
45
June, 2020
45
March, 2023
34
August, 2021
25
May, 2020
24
January, 2020
22
January, 2021
22
November, 2022
18
February, 2020
15
March, 2020
13
February, 2023
10
April, 2020
10
August, 2017
7
August, 2018
7
October, 2019
6
January, 2022
5
May, 2022
3
November, 2020
2
March, 2024
2
October, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
803
bed bed3+
387
tsv
231
bigWig
91
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1333
Homo sapiens
Biosample type
1049
primary cell
153
tissue
70
in vitro differentiated cells
60
cell line
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
948
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
913
hg19
350
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
1333 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
8
3
1
1
2
4
fibroblast
16
4
6
2
epithelial cell of proximal tubule
16
1
1
2
1
1
pericyte cell
10
10
1
1
+ See 194 more…
tissue
adipose tissue
3
2
8
7
6
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 25 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
mesenchymal stem cell
1
3
3
2
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
HT1080
1
2
1
fibroblast of cardiac tissue
2
2
colon epithelial cell
1
1
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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