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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
151
target gene predictions
109
accessible chromatin
107
chromatin state
gene expression
37
binding sites
33
histone modifications
22
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
284
September, 2022
158
February, 2021
69
November, 2021
30
June, 2020
22
February, 2024
19
May, 2021
13
October, 2022
11
August, 2017
11
March, 2020
10
August, 2021
10
May, 2020
9
January, 2020
9
January, 2022
8
September, 2023
7
November, 2022
6
March, 2023
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
1
February, 2023
1
June, 2021
Available data
558
bed bed3+
96
bed bed9
66
bigWig
22
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
695
Homo sapiens
Biosample type
308
tissue
273
primary cell
65
cell line
48
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
611
AMP
69
ENCODE
6
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
668
hg19
201
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
695 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
1
4
1
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
1
+ See 22 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 43 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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