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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
303
candidate regulatory elements
227
target gene predictions
179
chromatin state
146
accessible chromatin
81
histone modifications
71
gene expression
53
eQTL
52
binding sites
42
Fine-mapped variants
33
variant allelic effects
14
differential activity
2
pQTL
1
caQTL
Date released
464
September, 2022
289
February, 2021
69
November, 2021
50
June, 2020
49
March, 2020
35
January, 2020
33
May, 2021
27
February, 2020
27
January, 2022
26
May, 2020
25
February, 2024
20
September, 2023
18
October, 2022
17
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
March, 2024
4
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
856
bed bed3+
162
bed bed9
135
tsv
83
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
1203
Homo sapiens
Biosample type
676
tissue
331
primary cell
141
cell line
54
in vitro differentiated cells
2
stem cell
Organ
937
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1109
AMP
69
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
1083
hg19
348
GRCh38
2
hg18
month_released!
February, 2023
BIOSAMPLE
TYPE
1204 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
pQTL
caQTL
tissue
brain
29
16
18
2
3
1
2
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
4
1
1
sigmoid colon
10
7
5
1
+ See 87 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 57 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 28 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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