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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
239
candidate regulatory elements
153
target gene predictions
138
accessible chromatin
125
chromatin state
70
differential activity
38
binding sites
32
variant allelic effects
31
histone modifications
23
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
345
September, 2022
182
February, 2021
64
September, 2023
53
November, 2021
35
June, 2020
29
May, 2020
26
August, 2021
23
January, 2020
17
February, 2024
14
October, 2022
13
May, 2021
9
March, 2020
7
August, 2017
7
January, 2022
7
November, 2022
6
March, 2023
3
April, 2020
3
February, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
1
May, 2019
Available data
639
bed bed3+
118
bed bed9
91
bigWig
78
tsv
4
bigBed bed9
1
bigBed narrowPeak
Organism
859
Homo sapiens
Biosample type
370
primary cell
370
tissue
69
cell line
49
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
735
AMP
62
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
772
hg19
227
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
859 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 82 more…
tissue
kidney
29
14
10
16
1
1
2
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 22 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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