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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
349
candidate regulatory elements
gene expression
229
target gene predictions
197
chromatin state
175
accessible chromatin
79
histone modifications
70
differential activity
54
eQTL
53
binding sites
46
variant allelic effects
42
Fine-mapped variants
2
caQTL
2
pQTL
Date released
525
September, 2022
290
February, 2021
67
September, 2023
55
June, 2020
53
November, 2021
47
March, 2020
45
May, 2020
38
January, 2020
26
August, 2021
25
January, 2022
24
May, 2021
19
October, 2022
17
February, 2024
15
February, 2020
13
August, 2017
7
November, 2022
6
March, 2023
5
May, 2019
3
April, 2020
3
May, 2022
2
January, 2021
2
May, 2024
2
November, 2020
2
October, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
1
November, 2019
Available data
938
bed bed3+
184
bed bed9
128
tsv
108
bigWig
10
bigBed bed9
1
bigBed narrowPeak
Organism
1297
Homo sapiens
Biosample type
701
tissue
398
primary cell
145
cell line
52
in vitro differentiated cells
2
stem cell
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
1172
AMP
62
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
1185
hg19
375
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
1298 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
differential activity
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
pQTL
tissue
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 81 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
1
10
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
osteoblast
2
2
1
5
2
3
+ See 89 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
SK-N-MC
2
1
1
1
1
2
+ See 29 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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