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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
candidate regulatory elements
gene expression
169
target gene predictions
141
accessible chromatin
140
chromatin state
70
differential activity
39
binding sites
33
histone modifications
32
variant allelic effects
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
390
September, 2022
197
February, 2021
64
September, 2023
55
November, 2021
36
June, 2020
29
May, 2020
26
August, 2021
23
January, 2020
17
February, 2024
14
May, 2021
14
October, 2022
9
March, 2020
8
January, 2022
7
August, 2017
7
November, 2022
6
March, 2023
3
April, 2020
3
February, 2020
3
May, 2022
2
January, 2021
2
May, 2024
2
November, 2020
2
October, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
1
May, 2019
Available data
688
bed bed3+
133
bed bed9
93
bigWig
80
tsv
4
bigBed bed9
1
bigBed narrowPeak
Organism
926
Homo sapiens
Biosample type
430
tissue
374
primary cell
72
cell line
49
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
798
AMP
62
KPMP
55
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
836
hg19
245
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
926 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
tissue
kidney
29
14
10
16
1
2
1
1
placenta
26
15
1
14
1
2
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 23 more…
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 85 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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