Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
gene expression
220
candidate regulatory elements
143
target gene predictions
127
accessible chromatin
115
chromatin state
70
differential activity
31
variant allelic effects
30
binding sites
25
eQTL
21
histone modifications
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
315
September, 2022
271
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
28
May, 2020
25
June, 2020
23
January, 2020
19
February, 2024
18
February, 2020
16
May, 2021
13
October, 2022
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
580
bed bed3+
312
tsv
108
bed bed9
93
txt
90
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1039
Homo sapiens
Biosample type
591
primary cell
396
tissue
cell line
51
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
611
kidney
429
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
820
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
705
hg19
216
GRCh38
2
hg18
biosample_type!
cell line
BIOSAMPLE
TYPE
1039 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
6
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
pericyte cell
1
10
10
1
glomerular endothelial cell
14
2
1
2
1
1
osteoblast
2
2
2
5
1
3
2
+ See 111 more…
tissue
kidney
7
29
14
10
16
1
1
1
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 26 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download