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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
364
candidate regulatory elements
251
gene expression
227
target gene predictions
192
chromatin state
153
accessible chromatin
70
differential activity
45
binding sites
35
histone modifications
33
variant allelic effects
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
546
September, 2022
364
February, 2021
157
September, 2023
62
November, 2021
41
June, 2020
38
August, 2021
29
May, 2020
24
January, 2020
20
February, 2024
19
May, 2021
18
February, 2020
16
October, 2022
13
March, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
865
bed bed3+
316
tsv
185
bed bed9
100
bigWig
93
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
1406
Homo sapiens
Biosample type
609
primary cell
577
tissue
168
cell line
51
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1175
AMP
155
KPMP
62
ENCODE
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
1067
hg19
304
GRCh38
2
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
1406 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
pericyte cell
1
10
1
10
glomerular endothelial cell
2
14
1
1
2
1
osteoblast
2
2
2
1
5
3
2
+ See 116 more…
tissue
kidney
29
7
14
16
10
1
2
1
1
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
11
1
right kidney
20
10
10
1
1
+ See 30 more…
cell line
A549
21
19
18
1
2
1
HEK293
3
1
1
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
+ See 27 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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