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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
290
candidate regulatory elements
260
gene expression
233
target gene predictions
150
accessible chromatin
149
chromatin state
70
differential activity
49
binding sites
41
histone modifications
32
variant allelic effects
25
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
417
September, 2022
346
February, 2021
157
September, 2023
70
February, 2024
55
November, 2021
46
August, 2021
45
June, 2020
29
May, 2020
24
January, 2020
22
May, 2021
18
February, 2020
13
March, 2020
13
October, 2022
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
803
bed bed3+
325
tsv
142
bed bed9
93
bigWig
93
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
1309
Homo sapiens
Biosample type
597
primary cell
431
tissue
199
cell line
80
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1088
AMP
155
KPMP
55
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
962
hg19
304
GRCh38
2
hg18
organ_slims!
lung
BIOSAMPLE
TYPE
1309 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
pericyte cell
1
10
10
1
glomerular endothelial cell
2
14
1
2
1
1
trophoblast cell
7
5
1
4
1
+ See 114 more…
tissue
kidney
29
7
14
10
16
1
2
1
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 32 more…
cell line
H1-hESC
1
8
39
1
1
2
1
H9
7
8
1
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 38 more…
in vitro differentiated cells
adipocyte
4
1
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
chondrocyte
5
+ See 16 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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