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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
candidate regulatory elements
122
target gene predictions
98
accessible chromatin
84
chromatin state
gene expression
37
binding sites
30
histone modifications
23
eQTL
16
variant allelic effects
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
218
September, 2022
133
February, 2021
56
November, 2021
27
June, 2020
18
May, 2021
17
February, 2024
13
October, 2022
10
August, 2017
10
August, 2021
10
March, 2020
10
May, 2020
9
January, 2020
8
January, 2022
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
May, 2024
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
February, 2023
1
June, 2021
Available data
467
bed bed3+
74
bed bed9
58
bigWig
10
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
569
Homo sapiens
Biosample type
246
primary cell
209
tissue
65
cell line
48
in vitro differentiated cells
1
stem cell
Organ
604
epithelium
447
brain
397
connective tissue
394
kidney
363
musculature of body
310
lung
286
intestine
239
limb
234
heart
217
bodily fluid
212
vasculature
206
blood
205
embryo
202
skin of body
196
pancreas
172
large intestine
167
blood vessel
146
extraembryonic component
128
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
74
adipose tissue
73
placenta
72
adrenal gland
65
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
502
AMP
56
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
555
hg19
165
GRCh38
2
hg18
annotation_type!
differential activity
gene expression
BIOSAMPLE
TYPE
569 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 34 more…
tissue
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
1
4
1
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
1
omental fat pad
5
2
2
2
2
3
+ See 15 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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