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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
candidate regulatory elements
121
target gene predictions
97
accessible chromatin
83
chromatin state
35
binding sites
29
histone modifications
15
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
215
September, 2022
130
February, 2021
56
November, 2021
26
June, 2020
19
February, 2024
18
May, 2021
12
October, 2022
10
August, 2017
10
March, 2020
9
January, 2020
9
May, 2020
8
August, 2021
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
459
bed bed3+
73
bed bed9
58
bigWig
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
549
Homo sapiens
Biosample type
233
primary cell
202
tissue
65
cell line
48
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
484
AMP
56
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
549
hg19
164
GRCh38
2
hg18
organ_slims!
artery
BIOSAMPLE
TYPE
549 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
5
1
3
2
+ See 32 more…
tissue
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
1
1
3
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
omental fat pad
5
2
2
2
1
3
+ See 13 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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