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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
206
candidate regulatory elements
206
target gene predictions
112
chromatin state
110
accessible chromatin
61
gene expression
50
binding sites
40
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
299
September, 2022
207
February, 2021
72
February, 2024
58
November, 2021
37
June, 2020
28
May, 2021
19
August, 2021
17
September, 2023
14
October, 2022
11
August, 2017
11
March, 2020
10
January, 2020
10
May, 2020
9
February, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
644
bed bed3+
101
bed bed9
75
tsv
60
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
846
Homo sapiens
Biosample type
309
primary cell
264
tissue
192
cell line
79
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
764
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
761
hg19
245
GRCh38
2
hg18
BIOSAMPLE
TYPE
846 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
trophoblast cell
7
5
4
1
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
+ See 48 more…
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
transverse colon
8
5
4
1
1
+ See 24 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
+ See 34 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
chondrocyte
5
+ See 15 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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