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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
173
candidate regulatory elements
165
target gene predictions
159
accessible chromatin
101
chromatin state
95
gene expression
42
binding sites
39
differential activity
36
eQTL
36
histone modifications
27
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
262
September, 2022
186
February, 2021
74
November, 2021
52
May, 2021
45
March, 2023
44
February, 2024
31
June, 2020
20
January, 2021
19
August, 2021
19
March, 2020
17
September, 2023
16
May, 2020
14
January, 2020
13
August, 2017
13
October, 2022
12
January, 2022
11
February, 2020
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2018
2
March, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
621
bed bed3+
132
tsv
111
bigWig
87
bed bed9
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
892
Homo sapiens
Biosample type
400
primary cell
341
tissue
97
cell line
53
in vitro differentiated cells
1
stem cell
Organ
947
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
776
AMP
74
ENCODE
20
T1D
15
KPMP
4
ITG
community
3
LungMap
Genome assembly (visualization)
738
hg19
224
GRCh38
2
hg18
award.project!
community
BIOSAMPLE
TYPE
892 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
differential activity
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
pancreatic ductal cell
3
6
3
1
3
2
1
pancreatic beta cell
3
8
3
3
1
osteoblast
2
2
5
1
2
3
2
+ See 57 more…
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
adipose tissue
7
8
2
6
3
1
4
1
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 28 more…
cell line
EndoC_BH1
1
8
8
1
1
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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