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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
accessible chromatin
101
candidate regulatory elements
98
target gene predictions
72
gene expression
64
chromatin state
42
binding sites
37
histone modifications
27
eQTL
18
differential activity
16
variant allelic effects
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
163
September, 2022
130
February, 2021
54
November, 2021
47
February, 2024
23
June, 2020
21
August, 2021
19
March, 2020
19
May, 2021
17
September, 2023
12
October, 2022
11
February, 2020
11
March, 2023
10
August, 2017
9
May, 2020
8
January, 2020
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
413
bed bed3+
90
tsv
72
bigWig
54
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
593
Homo sapiens
Biosample type
326
primary cell
153
tissue
57
in vitro differentiated cells
56
cell line
1
stem cell
Organ
949
epithelium
652
kidney
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
515
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
492
hg19
175
GRCh38
4
hg18
organ_slims!
brain
BIOSAMPLE
TYPE
593 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
8
1
3
13
1
1
4
2
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 45 more…
tissue
liver
4
13
10
1
9
1
2
7
1
1
adipose tissue
2
7
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 8 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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