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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
205
candidate regulatory elements
152
target gene predictions
115
chromatin state
103
accessible chromatin
50
gene expression
29
histone modifications
25
binding sites
20
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
321
September, 2022
176
February, 2021
59
November, 2021
26
June, 2020
19
February, 2024
19
May, 2021
17
September, 2023
October, 2022
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
6
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
542
bed bed3+
108
bed bed9
64
bigWig
64
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
739
Homo sapiens
Biosample type
287
primary cell
276
tissue
125
cell line
50
in vitro differentiated cells
1
stem cell
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
653
AMP
59
ENCODE
15
KPMP
6
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
666
hg19
199
GRCh38
2
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
739 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
2
2
fibroblast of lung
6
4
4
foreskin fibroblast
6
2
1
1
2
2
+ See 48 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
+ See 10 more…
cell line
A549
21
19
18
1
1
1
IMR-90
2
2
1
1
1
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
WI38
5
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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