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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
121
candidate regulatory elements
116
accessible chromatin
104
target gene predictions
78
chromatin state
76
gene expression
45
binding sites
30
histone modifications
29
eQTL
27
variant allelic effects
26
differential activity
18
Fine-mapped variants
caQTL
2
pQTL
Date released
183
September, 2022
144
February, 2021
53
November, 2021
37
September, 2023
33
February, 2024
24
June, 2020
24
March, 2020
24
May, 2020
22
January, 2020
19
May, 2021
17
February, 2020
12
August, 2021
12
October, 2022
11
March, 2023
10
January, 2022
8
August, 2017
7
November, 2022
5
April, 2020
4
November, 2019
4
October, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
452
bed bed3+
118
tsv
80
bigWig
70
bed bed9
11
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
672
Homo sapiens
Biosample type
381
primary cell
203
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
947
epithelium
652
kidney
466
brain
458
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
263
vasculature
253
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
571
AMP
53
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
555
hg19
201
GRCh38
2
hg18
annotation_type!
caQTL
BIOSAMPLE
TYPE
672 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 62 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
tibial nerve
6
3
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
coronary artery
3
3
3
3
1
2
2
3
tibial artery
3
3
2
3
1
2
2
3
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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