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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
accessible chromatin
86
candidate regulatory elements
83
target gene predictions
53
chromatin state
51
gene expression
33
binding sites
27
histone modifications
23
eQTL
18
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
129
September, 2022
116
February, 2021
51
November, 2021
21
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
14
May, 2020
12
February, 2020
12
March, 2020
12
October, 2022
11
August, 2021
11
January, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
4
January, 2021
4
May, 2022
3
April, 2020
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
352
bed bed3+
71
tsv
59
bigWig
45
bed bed9
7
txt
3
bigBed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
494
Homo sapiens
Biosample type
292
primary cell
120
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
415
AMP
51
ENCODE
15
KPMP
4
ITG
4
T1D
3
LungMap
2
community
Genome assembly (visualization)
418
hg19
134
GRCh38
2
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
494 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 48 more…
tissue
adipose tissue
2
7
8
6
3
1
4
1
tibial nerve
3
6
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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