Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
target gene predictions
143
candidate regulatory elements
103
accessible chromatin
80
chromatin state
61
gene expression
44
binding sites
35
histone modifications
21
eQTL
18
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
210
September, 2022
164
February, 2021
69
February, 2024
52
November, 2021
31
June, 2020
23
May, 2021
19
August, 2021
17
September, 2023
13
March, 2020
13
May, 2020
13
October, 2022
12
February, 2020
11
January, 2020
8
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
521
bed bed3+
79
tsv
72
bed bed9
59
bigWig
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
697
Homo sapiens
Biosample type
303
primary cell
158
cell line
155
tissue
79
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
621
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
613
hg19
213
GRCh38
2
hg18
BIOSAMPLE
TYPE
697 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
trophoblast cell
5
7
1
4
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
4
6
4
2
+ See 47 more…
cell line
H1-hESC
39
1
1
1
8
2
1
H9
8
7
1
GM23248
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 26 more…
tissue
adipose tissue
8
7
2
6
3
1
4
1
tibial nerve
3
6
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
chorionic villus
4
8
4
+ See 13 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
chondrocyte
5
+ See 15 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
Download