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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
candidate regulatory elements
262
gene expression
240
target gene predictions
157
chromatin state
153
accessible chromatin
70
differential activity
51
binding sites
41
histone modifications
34
variant allelic effects
27
eQTL
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
435
September, 2022
352
February, 2021
157
September, 2023
70
February, 2024
55
November, 2021
46
August, 2021
46
June, 2020
32
May, 2020
25
January, 2020
23
May, 2021
21
February, 2020
16
March, 2020
15
October, 2022
8
August, 2017
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
1
November, 2019
Available data
830
bed bed3+
331
tsv
149
bed bed9
95
bigWig
93
txt
5
bigBed bed9
1
bigBed narrowPeak
Organism
1350
Homo sapiens
Biosample type
613
primary cell
456
tissue
199
cell line
80
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1129
AMP
155
KPMP
55
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
1000
hg19
318
GRCh38
2
hg18
BIOSAMPLE
TYPE
1350 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
pericyte cell
1
10
1
10
glomerular endothelial cell
2
14
1
1
2
1
trophoblast cell
7
5
4
1
1
+ See 115 more…
tissue
kidney
29
7
14
16
10
1
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 33 more…
cell line
H1-hESC
1
8
39
1
1
2
1
H9
7
8
1
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 38 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
chondrocyte
5
+ See 16 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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