Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
245
candidate regulatory elements
156
target gene predictions
141
accessible chromatin
128
chromatin state
70
differential activity
38
binding sites
34
variant allelic effects
31
histone modifications
27
eQTL
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
354
September, 2022
300
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
36
June, 2020
32
May, 2020
25
January, 2020
21
February, 2020
19
February, 2024
16
May, 2021
15
March, 2020
14
October, 2022
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
1
November, 2019
Available data
653
bed bed3+
321
tsv
121
bed bed9
93
bigWig
93
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
1135
Homo sapiens
Biosample type
591
primary cell
420
tissue
72
cell line
51
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
651
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
249
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
916
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
795
hg19
237
GRCh38
2
hg18
month_released!
April, 2019
BIOSAMPLE
TYPE
1135 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
pericyte cell
1
10
10
1
glomerular endothelial cell
14
2
1
2
1
1
osteoblast
2
2
2
5
1
3
2
+ See 111 more…
tissue
kidney
7
29
14
10
15
1
1
2
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 27 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download